Hinweis: Die Berechnung der Tabelle erfolgt nach der 3-Punkte-Regel
| # | Mannschaft | Sp. | S | U | N | Tore | Dif | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Bayern München II | 351 | 201 | 83 | 67 | 759:386 | 373 | 686 |
| 2 |
|
1. FC Nürnberg II | 378 | 168 | 92 | 117 | 675:521 | 154 | 596 |
| 3 |
|
FV Illertissen | 378 | 167 | 88 | 122 | 624:546 | 78 | 589 |
| 4 |
|
FC Augsburg II | 379 | 139 | 98 | 140 | 620:553 | 67 | 515 |
| 5 |
|
TSV Buchbach | 378 | 139 | 97 | 140 | 543:561 | -18 | 514 |
| 6 |
|
1. FC Schweinfurt 05 | 342 | 138 | 86 | 117 | 599:533 | 66 | 500 |
| 7 |
|
SpVgg Greuther Fürth II | 379 | 131 | 83 | 164 | 525:577 | -52 | 476 |
| 8 |
|
Wacker Burghausen | 304 | 128 | 66 | 109 | 461:397 | 64 | 450 |
| 9 |
|
SpVgg Bayreuth | 270 | 116 | 59 | 94 | 449:407 | 42 | 407 |
| 10 |
|
FC Memmingen | 338 | 106 | 84 | 146 | 452:542 | -90 | 402 |
| 11 |
|
SV Schalding-Heining | 302 | 92 | 67 | 141 | 395:556 | -161 | 343 |
| 12 |
|
Viktoria Aschaffenburg | 279 | 89 | 73 | 115 | 391:451 | -60 | 340 |
| 13 |
|
Würzburger Kickers | 176 | 97 | 43 | 36 | 363:201 | 162 | 334 |
| 14 |
|
FC Ingolstadt 04 II | 246 | 95 | 69 | 82 | 416:356 | 60 | 309 |
| 15 |
|
SpVgg Unterhaching | 144 | 85 | 34 | 25 | 313:147 | 166 | 289 |
| 16 |
|
TSV 1860 Rosenheim | 242 | 70 | 59 | 112 | 284:430 | -146 | 269 |
| 17 |
|
SV Heimstetten | 244 | 71 | 53 | 119 | 342:482 | -140 | 266 |
| 18 |
|
TSV 1860 München II | 176 | 95 | 39 | 42 | 245:148 | 97 | 261 |
| 19 |
|
VfB Eichstätt | 173 | 69 | 41 | 62 | 283:264 | 19 | 248 |
| 20 |
|
TSV Aubstadt | 132 | 58 | 34 | 39 | 228:168 | 60 | 208 |
| 21 |
|
TSV 1896 Rain | 210 | 56 | 39 | 114 | 249:411 | -162 | 207 |
| 22 |
|
SV Seligenporten | 178 | 51 | 39 | 88 | 222:327 | -105 | 192 |
| 23 |
|
VfR Garching | 160 | 51 | 36 | 71 | 232:300 | -68 | 189 |
| 24 |
|
FC Pipinsried | 146 | 39 | 33 | 74 | 178:303 | -125 | 150 |
| 25 |
|
Eintracht Bamberg | 138 | 36 | 41 | 61 | 177:248 | -71 | 149 |
| 26 |
|
DJK Vilzing | 68 | 34 | 12 | 22 | 118:104 | 14 | 114 |
| 27 |
|
Türkgücü München | 91 | 27 | 13 | 28 | 91:94 | -3 | 92 |
| 28 |
|
SpVgg Bayern Hof | 108 | 23 | 19 | 66 | 116:211 | -95 | 88 |
| 29 |
|
TSV 1860 München | 36 | 26 | 5 | 5 | 87:27 | 60 | 83 |
| 30 |
|
SpVgg Ansbach | 68 | 23 | 13 | 32 | 94:117 | -23 | 82 |
| 31 |
|
SC Eltersdorf | 76 | 22 | 14 | 40 | 105:154 | -49 | 80 |
| 32 |
|
Jahn Regensburg | 34 | 19 | 7 | 8 | 61:36 | 25 | 64 |
| 33 |
|
FC Ismaning | 38 | 8 | 12 | 18 | 38:48 | -10 | 36 |
| 34 |
|
SpVgg Hankofen-Hailing | 38 | 10 | 6 | 22 | 47:90 | -43 | 36 |
| 35 |
|
VfL Frohnlach | 38 | 8 | 11 | 19 | 40:64 | -24 | 35 |
| 36 |
|
FC Amberg | 34 | 6 | 11 | 17 | 36:57 | -21 | 29 |
| 37 |
|
FC Unterföhring | 36 | 3 | 11 | 22 | 36:87 | -51 | 20 |
