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| 01.09.2012 | 13:00 | JK Nõmme Kalju | - | FC Levadia | 2:2 (0:1) | |
| 16:00 | JK Tallinna Kalev | - | FC Viljandi | 2:2 (1:1) | ||
| 16:00 | Paide Linnameeskond | - | FC Kuressaare | 1:1 (1:0) | ||
| 16:00 | JK Narva Trans | - | JK Tammeka | 4:0 (0:0) | ||
| 16:00 | JK Sillamäe Kalev | - | FC Flora | 1:2 (0:1) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
JK Nõmme Kalju | 27 | 23 | 3 | 1 | 77:9 | 68 | 72 |
| 2 |
|
FC Levadia | 27 | 18 | 8 | 1 | 65:15 | 50 | 62 |
| 3 |
|
FC Flora | 27 | 19 | 2 | 6 | 60:19 | 41 | 59 |
| 4 |
|
JK Narva Trans | 27 | 12 | 5 | 10 | 34:27 | 7 | 41 |
| 5 |
|
JK Sillamäe Kalev | 27 | 10 | 9 | 8 | 33:30 | 3 | 39 |
| 6 |
|
Paide Linnameeskond | 27 | 9 | 5 | 13 | 24:37 | -13 | 32 |
| 7 |
|
FC Viljandi | 27 | 5 | 7 | 15 | 24:52 | -28 | 22 |
| 8 |
|
FC Kuressaare | 27 | 4 | 8 | 15 | 20:60 | -40 | 20 |
| 9 |
|
JK Tallinna Kalev | 27 | 4 | 7 | 16 | 21:64 | -43 | 19 |
| 10 |
|
JK Tammeka | 27 | 1 | 6 | 20 | 15:60 | -45 | 9 |
| Champions League Quali. | |
| Europa League Quali. | |
| Relegation | |
| Abstieg |
