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| 29.04.2016 | 06:00 | Kamatamare Sanuki | - | Giravanz Kitakyushu | 1:1 (0:1) | |
| 06:00 | V-Varen Nagasaki | - | Yokohama FC | 1:3 (0:0) | ||
| 07:00 | FC Gifu | - | Renofa Yamaguchi | 1:2 (1:0) | ||
| 07:00 | Fagiano Okayama | - | FC Machida Zelvia | 2:2 (2:1) | ||
| 07:00 | Hokkaido Consadole Sapporo | - | Tokushima Vortis | 1:0 (1:0) | ||
| 09:00 | Cerezo Osaka | - | Kyoto Sanga FC | 0:2 (0:1) | ||
| 10:00 | Mito HollyHock | - | JEF United Chiba | 1:0 (1:0) | ||
| 10:00 | Shimizu S-Pulse | - | Zweigen Kanazawa | 4:1 (1:1) | ||
| 12:00 | Ehime FC | - | Matsumoto Yamaga | 0:0 (0:0) | ||
| 12:30 | Thespakusatsu Gunma | - | Tokyo Verdy | 2:2 (1:2) | ||
| 06.07.2016 | 12:00 | Montedio Yamagata | - | Roasso Kumamoto | 4:1 (4:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC Machida Zelvia | 10 | 6 | 3 | 1 | 13:6 | 7 | 21 |
| 2 |
|
Hokkaido Consadole Sapporo | 10 | 6 | 2 | 2 | 14:6 | 8 | 20 |
| 3 |
|
Cerezo Osaka | 10 | 6 | 2 | 2 | 11:7 | 4 | 20 |
| 4 |
|
Shimizu S-Pulse | 10 | 5 | 3 | 2 | 14:8 | 6 | 18 |
| 5 |
|
Renofa Yamaguchi | 10 | 5 | 3 | 2 | 15:13 | 2 | 18 |
| 6 |
|
Yokohama FC | 10 | 5 | 2 | 3 | 13:7 | 6 | 17 |
| 7 |
|
Matsumoto Yamaga | 10 | 4 | 4 | 2 | 11:7 | 4 | 16 |
| 8 |
|
Fagiano Okayama | 10 | 4 | 4 | 2 | 14:11 | 3 | 16 |
| 9 |
|
Kamatamare Sanuki | 10 | 4 | 3 | 3 | 14:13 | 1 | 15 |
| 10 |
|
FC Gifu | 10 | 5 | 0 | 5 | 13:17 | -4 | 15 |
| 11 |
|
Kyoto Sanga FC | 10 | 3 | 5 | 2 | 12:11 | 1 | 14 |
| 12 |
|
JEF United Chiba | 10 | 4 | 2 | 4 | 10:11 | -1 | 14 |
| 13 |
|
Ehime FC | 10 | 3 | 5 | 2 | 8:9 | -1 | 14 |
| 14 |
|
Roasso Kumamoto | 10 | 4 | 2 | 4 | 9:11 | -2 | 14 |
| 15 |
|
Mito HollyHock | 10 | 3 | 3 | 4 | 10:9 | 1 | 12 |
| 16 |
|
Tokyo Verdy | 10 | 2 | 4 | 4 | 7:11 | -4 | 10 |
| 17 |
|
Montedio Yamagata | 10 | 2 | 3 | 5 | 11:12 | -1 | 9 |
| 18 |
|
Thespakusatsu Gunma | 10 | 2 | 2 | 6 | 10:11 | -1 | 8 |
| 19 |
|
Tokushima Vortis | 10 | 2 | 2 | 6 | 8:13 | -5 | 8 |
| 20 |
|
V-Varen Nagasaki | 10 | 1 | 5 | 4 | 7:14 | -7 | 8 |
| 21 |
|
Giravanz Kitakyushu | 10 | 1 | 3 | 6 | 6:15 | -9 | 6 |
| 22 |
|
Zweigen Kanazawa | 10 | 1 | 2 | 7 | 10:18 | -8 | 5 |
| Aufstieg | |
| Playoffs | |
| Relegation | |
| Abstieg |
