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| 30.04.2010 | 18:00 | Borussia Dortmund II | - | Jahn Regensburg | 2:0 (2:0) | |
| 18:00 | 1. FC Heidenheim 1846 | - | Dynamo Dresden | 3:0 (3:0) | ||
| 18:00 | Wuppertaler SV | - | FC Carl Zeiss Jena | 1:1 (1:0) | ||
| 18:00 | VfB Stuttgart II | - | SpVgg Unterhaching | 3:1 (2:0) | ||
| 18:00 | SV Wehen Wiesbaden | - | FC Ingolstadt 04 | 1:5 (1:3) | ||
| 18:00 | SV Sandhausen | - | Kickers Offenbach | 1:1 (1:0) | ||
| 18:00 | Bayern München II | - | Werder Bremen II | 2:1 (1:0) | ||
| 18:00 | Erzgebirge Aue | - | Eintracht Braunschweig | 2:1 (0:0) | ||
| 18:00 | Rot-Weiß Erfurt | - | Wacker Burghausen | 1:1 (1:1) | ||
| 18:00 | VfL Osnabrück | - | Holstein Kiel | 3:1 (0:1) |
| » Tabelle | Heim | Auswärts | Hinrunde | Rückrunde | 1. Halbzeit | 2. Halbzeit |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Erzgebirge Aue | 37 | 20 | 8 | 9 | 56:39 | 17 | 68 |
| 2 |
|
VfL Osnabrück | 37 | 19 | 9 | 9 | 54:37 | 17 | 66 |
| 3 |
|
FC Ingolstadt 04 | 37 | 18 | 9 | 10 | 71:45 | 26 | 63 |
| 4 |
|
Eintracht Braunschweig | 37 | 17 | 10 | 10 | 54:36 | 18 | 61 |
| 5 |
|
FC Carl Zeiss Jena | 37 | 16 | 12 | 9 | 53:42 | 11 | 60 |
| 6 |
|
1. FC Heidenheim 1846 | 37 | 17 | 7 | 13 | 64:54 | 10 | 58 |
| 7 |
|
Kickers Offenbach | 37 | 14 | 12 | 11 | 51:34 | 17 | 54 |
| 8 |
|
Bayern München II | 37 | 15 | 9 | 13 | 54:61 | -7 | 54 |
| 9 |
|
Rot-Weiß Erfurt | 37 | 14 | 10 | 13 | 40:40 | 0 | 52 |
| 10 |
|
VfB Stuttgart II | 37 | 15 | 4 | 18 | 51:49 | 2 | 49 |
| 11 |
|
SpVgg Unterhaching | 37 | 12 | 11 | 14 | 48:49 | -1 | 47 |
| 12 |
|
Dynamo Dresden | 37 | 13 | 8 | 16 | 36:44 | -8 | 47 |
| 13 |
|
SV Wehen Wiesbaden | 37 | 13 | 8 | 16 | 49:60 | -11 | 47 |
| 14 |
|
SV Sandhausen | 37 | 11 | 13 | 13 | 53:62 | -9 | 46 |
| 15 |
|
Wacker Burghausen | 37 | 13 | 7 | 17 | 45:63 | -18 | 46 |
| 16 |
|
Jahn Regensburg | 37 | 11 | 12 | 14 | 41:46 | -5 | 45 |
| 17 |
|
Werder Bremen II | 37 | 12 | 8 | 17 | 47:53 | -6 | 44 |
| 18 |
|
Borussia Dortmund II | 37 | 11 | 6 | 20 | 40:54 | -14 | 39 |
| 19 |
|
Wuppertaler SV | 37 | 10 | 8 | 19 | 38:58 | -20 | 38 |
| 20 |
|
Holstein Kiel | 37 | 8 | 11 | 18 | 39:58 | -19 | 35 |
| Aufstieg | |
| Relegation | |
| Abstieg |
