| 1. Runde | 07.09.1988 | Velež Mostar | - | APOEL Nikosia | 1:0 |  |
|||
| 1. Runde | 05.10.1988 | APOEL Nikosia | - | Velež Mostar | 2:5 | |
|||
| 2. Runde | 26.10.1988 | Velež Mostar | - | Os Belenenses | 0:0 | ||||
| 2. Runde | 09.11.1988 | Os Belenenses | - | Velež Mostar | 3:4 i.E. | ||||
| Achtelfinale | 23.11.1988 | Heart of Midlothian | - | Velež Mostar | 3:0 | ||||
| Achtelfinale | 07.12.1988 | Velež Mostar | - | Heart of Midlothian | 2:1 |
Bosnien-Herzegowina