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| 17.09.2016 | 15:30 | KF Shkupi | - | FK Pelister | 2:1 (1:0) | |
| 18.09.2016 | 15:30 | Sileks Kratovo | - | FK Renova | 0:0 (0:0) | |
| 15:30 | Vardar Skopje | - | FK Rabotnički | 1:0 (1:0) | ||
| 15:30 | KF Shkëndija 79 | - | Makedonija GP | 3:0 (3:0) | ||
| 15:30 | FK Pobeda Junior | - | FK Bregalnica Štip | 0:0 (0:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Vardar Skopje | 6 | 5 | 1 | 0 | 15:2 | 13 | 16 |
| 2 |
|
FK Rabotnički | 6 | 4 | 0 | 2 | 9:5 | 4 | 12 |
| 3 |
|
FK Pelister | 6 | 3 | 1 | 2 | 11:6 | 5 | 10 |
| 4 |
|
KF Shkëndija 79 | 6 | 3 | 1 | 2 | 9:7 | 2 | 10 |
| 5 |
|
FK Renova | 6 | 2 | 3 | 1 | 4:2 | 2 | 9 |
| 6 |
|
Sileks Kratovo | 6 | 2 | 2 | 2 | 7:7 | 0 | 8 |
| 7 |
|
KF Shkupi | 6 | 2 | 2 | 2 | 5:5 | 0 | 8 |
| 8 |
|
FK Pobeda Junior | 6 | 1 | 1 | 4 | 4:9 | -5 | 4 |
| 9 |
|
FK Bregalnica Štip | 6 | 0 | 3 | 3 | 3:12 | -9 | 3 |
| 10 |
|
Makedonija GP | 6 | 0 | 2 | 4 | 3:15 | -12 | 2 |
| Champions League Quali. | |
| Europa League Quali. | |
| Relegation | |
| Abstieg |
|
# FK Pelister qualifizierte sich als Pokalsieger für die Europa-League-Qualifikation. |
