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| 30.05.2004 | 14:00 | SC Paderborn 07 | - | Preußen Münster | 2:2 (2:0) | |
| 14:00 | SG Wattenscheid 09 | - | Eintracht Braunschweig | 0:2 (0:0) | ||
| 14:00 | FC St. Pauli | - | KFC Uerdingen 05 | 1:1 (0:1) | ||
| 14:00 | Dynamo Dresden | - | VfR Neumünster | 1:0 (0:0) | ||
| 14:00 | Wuppertaler SV | - | Werder Bremen II | 1:0 (1:0) | ||
| 14:00 | Hamburger SV II | - | 1. FC Köln II | 2:0 (0:0) | ||
| 14:00 | Holstein Kiel | - | Sachsen Leipzig | 3:1 (2:1) | ||
| 14:00 | Rot-Weiss Essen | - | Borussia Dortmund II | 3:1 (0:0) | ||
| 14:00 | Chemnitzer FC | - | FC Schalke 04 II | 0:6 (0:2) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Rot-Weiss Essen | 33 | 22 | 5 | 6 | 75:26 | 49 | 71 |
| 2 |
|
Dynamo Dresden | 33 | 18 | 11 | 4 | 51:25 | 26 | 65 |
| 3 |
|
Wuppertaler SV | 33 | 18 | 8 | 7 | 48:35 | 13 | 62 |
| 4 |
|
SC Paderborn 07 | 33 | 16 | 11 | 6 | 52:38 | 14 | 59 |
| 5 |
|
Werder Bremen II | 33 | 16 | 7 | 10 | 55:42 | 13 | 55 |
| 6 |
|
Eintracht Braunschweig | 33 | 14 | 7 | 12 | 46:40 | 6 | 49 |
| 7 |
|
FC St. Pauli | 33 | 12 | 8 | 13 | 42:37 | 5 | 44 |
| 8 |
|
Borussia Dortmund II | 33 | 12 | 7 | 14 | 43:45 | -2 | 43 |
| 9 |
|
KFC Uerdingen 05 | 33 | 12 | 7 | 14 | 45:48 | -3 | 43 |
| 10 |
|
Holstein Kiel | 33 | 11 | 8 | 14 | 51:55 | -4 | 41 |
| 11 |
|
Hamburger SV II | 33 | 10 | 11 | 12 | 31:46 | -15 | 41 |
| 12 |
|
1. FC Köln II | 33 | 10 | 10 | 13 | 52:52 | 0 | 40 |
| 13 |
|
SG Wattenscheid 09 | 33 | 11 | 7 | 15 | 51:59 | -8 | 40 |
| 14 |
|
Chemnitzer FC | 33 | 12 | 4 | 17 | 29:49 | -20 | 40 |
| 15 |
|
Preußen Münster | 33 | 9 | 12 | 12 | 39:45 | -6 | 39 |
| 16 |
|
FC Schalke 04 II | 33 | 10 | 8 | 15 | 52:66 | -14 | 38 |
| 17 |
|
Sachsen Leipzig | 33 | 4 | 12 | 17 | 34:54 | -20 | 24 |
| 18 |
|
VfR Neumünster | 33 | 3 | 11 | 19 | 30:64 | -34 | 20 |
