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| 03.03.2007 | 14:00 | Holstein Kiel | - | VfB Lübeck | 1:1 (0:1) | |
| 14:00 | Rot Weiss Ahlen | - | Wuppertaler SV | 1:1 (0:0) | ||
| 14:00 | FC St. Pauli | - | Hertha BSC II | 3:0 (0:0) | ||
| 14:00 | Fortuna Düsseldorf | - | Dynamo Dresden | 1:1 (0:1) | ||
| 14:00 | Hamburger SV II | - | Werder Bremen II | 0:3 (0:1) | ||
| 04.03.2007 | 14:00 | Bayer Leverkusen II | - | SV Wilhelmshaven | 1:1 (1:0) | |
| 14:00 | Bor. Mönchengladbach II | - | Borussia Dortmund II | 2:1 (0:0) | ||
| 13.03.2007 | 19:30 | VfL Osnabrück | - | 1. FC Magdeburg | 1:1 (0:0) | |
| 17.04.2007 | 18:30 | Kickers Emden | - | 1. FC Union Berlin | 2:1 (1:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
VfL Osnabrück | 22 | 12 | 5 | 5 | 38:24 | 14 | 41 |
| 2 |
|
Hamburger SV II | 23 | 11 | 6 | 6 | 35:28 | 7 | 39 |
| 3 |
|
Kickers Emden | 23 | 11 | 6 | 6 | 31:25 | 6 | 39 |
| 4 |
|
FC St. Pauli | 23 | 10 | 8 | 5 | 29:24 | 5 | 38 |
| 5 |
|
Fortuna Düsseldorf | 22 | 9 | 9 | 4 | 33:25 | 8 | 36 |
| 6 |
|
Werder Bremen II | 23 | 10 | 4 | 9 | 37:31 | 6 | 34 |
| 7 |
|
VfB Lübeck | 23 | 10 | 4 | 9 | 30:26 | 4 | 34 |
| 8 |
|
Dynamo Dresden | 23 | 10 | 4 | 9 | 30:27 | 3 | 34 |
| 9 |
|
Wuppertaler SV | 23 | 9 | 7 | 7 | 31:30 | 1 | 34 |
| 10 |
|
1. FC Magdeburg | 23 | 9 | 7 | 7 | 28:27 | 1 | 34 |
| 11 |
|
Rot-Weiß Erfurt | 22 | 9 | 7 | 6 | 24:24 | 0 | 34 |
| 12 |
|
Rot Weiss Ahlen | 23 | 9 | 6 | 8 | 35:33 | 2 | 33 |
| 13 |
|
1. FC Union Berlin | 22 | 9 | 5 | 8 | 31:22 | 9 | 32 |
| 14 |
|
Holstein Kiel | 23 | 5 | 8 | 10 | 24:33 | -9 | 23 |
| 15 |
|
Hertha BSC II | 23 | 6 | 5 | 12 | 22:33 | -11 | 23 |
| 16 |
|
SV Wilhelmshaven | 22 | 5 | 7 | 10 | 25:33 | -8 | 22 |
| 17 |
|
Bayer Leverkusen II | 23 | 5 | 7 | 11 | 21:31 | -10 | 22 |
| 18 |
|
Borussia Dortmund II | 23 | 6 | 3 | 14 | 21:37 | -16 | 21 |
| 19 |
|
Bor. Mönchengladbach II | 23 | 4 | 6 | 13 | 22:34 | -12 | 18 |
