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| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Eintracht Braunschweig | 37 | 17 | 12 | 8 | 34:14 | 20 | 63 |
| 2 |
|
Erzgebirge Aue | 37 | 15 | 16 | 6 | 34:22 | 12 | 61 |
| 3 |
|
VfL Osnabrück | 37 | 16 | 11 | 10 | 32:19 | 13 | 59 |
| 4 |
|
FC Carl Zeiss Jena | 37 | 16 | 10 | 11 | 32:22 | 10 | 58 |
| 5 |
|
FC Ingolstadt 04 | 37 | 16 | 10 | 11 | 35:27 | 8 | 58 |
| 6 |
|
Kickers Offenbach | 37 | 14 | 14 | 9 | 23:18 | 5 | 56 |
| 7 |
|
SV Sandhausen | 37 | 15 | 10 | 12 | 34:33 | 1 | 55 |
| 8 |
|
Bayern München II | 37 | 13 | 15 | 9 | 30:30 | 0 | 54 |
| 9 |
|
Rot-Weiß Erfurt | 37 | 13 | 12 | 12 | 21:22 | -1 | 51 |
| 10 |
|
1. FC Heidenheim 1846 | 37 | 12 | 14 | 11 | 36:31 | 5 | 50 |
| 11 |
|
Werder Bremen II | 37 | 13 | 9 | 15 | 29:29 | 0 | 48 |
| 12 |
|
Jahn Regensburg | 37 | 11 | 15 | 11 | 26:27 | -1 | 48 |
| 13 |
|
SpVgg Unterhaching | 37 | 12 | 10 | 15 | 23:28 | -5 | 46 |
| 14 |
|
Dynamo Dresden | 37 | 11 | 11 | 15 | 17:24 | -7 | 44 |
| 15 |
|
Wuppertaler SV | 37 | 11 | 10 | 16 | 25:37 | -12 | 43 |
| 16 |
|
VfB Stuttgart II | 37 | 11 | 9 | 17 | 23:31 | -8 | 42 |
| 17 |
|
Borussia Dortmund II | 37 | 10 | 11 | 16 | 21:28 | -7 | 41 |
| 18 |
|
SV Wehen Wiesbaden | 37 | 10 | 10 | 17 | 25:36 | -11 | 40 |
| 19 |
|
Holstein Kiel | 37 | 8 | 14 | 15 | 27:37 | -10 | 38 |
| 20 |
|
Wacker Burghausen | 37 | 8 | 13 | 16 | 21:33 | -12 | 37 |
| Aufstieg | |
| Relegation | |
| Abstieg |
